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1

How many genes are there in plants (… and why are they there)?

Lieven Sterck, Stephane Rombauts, Klaas Vandepoele, Pierre Rouzé, Yves Van de Peer

Journal:

Current Opinion in Plant Biology

Year:

2007

Language:

english

File:

PDF, 348 KB

english, 2007

2

Genome annotation: which tools do we have for it?

Pierre Rouzé, Nathalie Pavy, Stephane Rombauts

Journal:

Current Opinion in Plant Biology

Year:

1999

Language:

english

File:

PDF, 803 KB

english, 1999

3

Plant Environmental Adaptation || EST Data Suggest That Poplar Is an Ancient Polyploid

Lieven Sterck, Stephane Rombauts, Stefan Jansson, Fredrik Sterky, Pierre Rouzé and Yves Van de Peer

Journal:

New Phytologist

Year:

2005

Language:

english

File:

PDF, 1.08 MB

english, 2005

4

Genome Annotation in Plants and Fungi: EuGene as a Model Platform

Foissac, Sylvain, Gouzy, Jerome, Rombauts, Stephane, Mathe, Catherine, Amselem, Joelle, Sterck, Lieven, de Peer, Yves, Rouze, Pierre, Schiex, Thomas

Journal:

Current Bioinformatics

Year:

2008

Language:

english

File:

PDF, 374 KB

english, 2008

5

Isotrétinoïne et grossesse : bilan français de 25 années de suivi

Rouzès, Agnès, Jonville-Béra, Annie-Pierre

Journal:

Year:

2014

Language:

french

File:

PDF, 239 KB

french, 2014

6

Orphan gene finding—an exon assembly approach

Philippe Blayo, Pierre Rouzé, Marie-France Sagot

Journal:

Theoretical Computer Science

Year:

2003

Language:

english

File:

PDF, 212 KB

english, 2003

7

Genome annotation

Sébastien Aubourg, Pierre Rouzé

Journal:

Plant Physiology and Biochemistry

Year:

2001

Language:

english

File:

PDF, 260 KB

english, 2001

8

Use of a proteome strategy for tagging proteins present at the plasma membrane

Véronique Santoni, David Rouquié, Patrick Doumas, Monique Mansion, Marc Boutry, Hervé Degand, Paul Dupree, Len Packman, Janine Sherrier, Tracy Prime, Guy Bauw, Esmeralda Posada, Pierre Rouzé, Patrice

Journal:

The Plant Journal

Year:

1998

Language:

english

File:

PDF, 232 KB

english, 1998

9

Plant cyclins: a unified nomenclature for plant A-, B- and D-type cyclins based on sequence organization

Jean-Pierre Renaudin, John H. Doonan, Donna Freeman, Junji Hashimoto, Heribert Hirt, Dirk Inzé, Thomas Jacobs, Hiroshi Kouchi, Pierre Rouzé, Margret Sauter, Arnould Savouré, David A. Sorrell, Venkates

Journal:

Plant Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.18 MB

english, 1996

10

Cloning of DNA fragments complementary to tobacco nitrate reductase mRNA and encoding epitopes common to the nitrate reductases from higher plants

Roger Calza, Eric Huttner, Michel Vincentz, Pierre Rouzé, Fabienne Galangau, Hervé Vaucheret, Isabelle Chérel, Christian Meyer, Jocelyne Kronenberger, Michel Caboche

Journal:

Molecular Genetics and Genomics

Year:

1987

Language:

english

File:

PDF, 1.31 MB

english, 1987

11

Molecular cloning and characterisation of the two homeologous genes coding for nitrate reductase in tobacco

Hervé Vaucheret, Michel Vincentz, Jocelyne Kronenberger, Michel Caboche, Pierre Rouzé

Journal:

Molecular Genetics and Genomics

Year:

1989

Language:

english

File:

PDF, 622 KB

english, 1989

12

Isolation and molecular characterization ofdTnp1, a mobile and defective transposable element ofNicotiana plumbaginifolia

Christian Meyer, Sylvie Pouteau, Pierre Rouzé, Michel Caboche

Journal:

Molecular Genetics and Genomics

Year:

1994

Language:

english

File:

PDF, 1.05 MB

english, 1994

13

Genomewide Structural Annotation and Evolutionary Analysis of the Type I MADS-Box Genes in Plants

Stefanie De Bodt, Jeroen Raes, Kobe Florquin, Stephane Rombauts, Pierre Rouzé, Günter Theißen, Yves Van de Peer

Journal:

Journal of Molecular Evolution

Year:

2003

Language:

english

File:

PDF, 1.23 MB

english, 2003

14

Unique Regulation of the Calvin Cycle in the Ultrasmall Green AlgaOstreococcus

Steven Robbens, Jörn Petersen, Henner Brinkmann, Pierre Rouzé, Yves Van de Peer

Journal:

Journal of Molecular Evolution

Year:

2007

Language:

english

File:

PDF, 356 KB

english, 2007

15

TheFTOGene, Implicated in Human Obesity, Is Found Only in Vertebrates and Marine Algae

Steven Robbens, Pierre Rouzé, J. Mark Cock, Jürg Spring, Alexandra Z. Worden, Yves Van de Peer

Journal:

Journal of Molecular Evolution

Year:

2008

Language:

english

File:

PDF, 214 KB

english, 2008

16

EST data suggest that poplar is an ancient polyploid

Lieven Sterck, Stephane Rombauts, Stefan Jansson, Fredrik Sterky, Pierre Rouzé, Yves Van de Peer

Journal:

New Phytologist

Year:

2005

Language:

english

File:

PDF, 238 KB

english, 2005

17

The small RNA world of plants

Eric Bonnet, Yves Van de Peer, Pierre Rouzé

Journal:

New Phytologist

Year:

2006

Language:

english

File:

PDF, 400 KB

english, 2006

18

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

Cock, J. Mark, Sterck, Lieven, Rouzé, Pierre, Scornet, Delphine, Allen, Andrew E., Amoutzias, Grigoris, Anthouard, Veronique, Artiguenave, François, Aury, Jean-Marc, Badger, Jonathan H.

Journal:

Year:

2010

Language:

english

File:

PDF, 985 KB

english, 2010

19

Genome sequence of the recombinant protein production host Pichia pastoris

De Schutter, Kristof, Lin, Yao-Cheng, Tiels, Petra, Van Hecke, Annelies, Glinka, Sascha, Weber-Lehmann, Jacqueline, Rouzé, Pierre, Van de Peer, Yves, Callewaert, Nico

Journal:

Nature Biotechnology

Year:

2009

Language:

english

File:

PDF, 637 KB

english, 2009

20

Analysis of T-DNA-mediated translational β-glucuronidase gene fusions

Sunee Kertbundit, Rosario Linacero, Pierre Rouzé, Ivan Galis, Jiri Macas, Francine Deboeck, Suzy Renckens, Jean-Pierre Hernalsteens, Henri De Greve

Journal:

Plant Molecular Biology

Year:

1998

Language:

english

File:

PDF, 347 KB

english, 1998

21

Nitrate reductase: a target for molecular and cellular studies in higher plants

Michel Caboche, Pierre Rouzé

Journal:

Trends in Genetics

Year:

1990

Language:

english

File:

PDF, 707 KB

english, 1990

22

Feature selection for splice site prediction: A new method using EDA-based feature ranking

Yvan Saeys, Sven Degroeve, Dirk Aeyels, Pierre Rouzé, Yves Van de Peer

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 409 KB

english, 2004

23

Predicting protein-protein interactions inArabidopsis thalianathrough integration of orthology, gene ontology and co-expression

Stefanie De Bodt, Sebastian Proost, Klaas Vandepoele, Pierre Rouzé, Yves Van de Peer

Journal:

Year:

2009

Language:

english

File:

PDF, 1.27 MB

english, 2009

24

Classification of Arabidopsis thaliana gene sequences: clustering of coding sequences into two groups according to codon usage improves gene prediction

Catherine Mathé, Anatoly Peresetsky, Patrice Déhais, Marc Van Montagu, Pierre Rouzé

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 635 KB

english, 1999

25

Monoclonal antibodies identify multiple epitopes on maize leaf nitrate reductase

Isabelle Cherel, Jeanne Grosclaude, Pierre Rouze

Journal:

Biochemical and Biophysical Research Communications

Year:

1985

Language:

english

File:

PDF, 425 KB

english, 1985

26

Antibody against octopine dehydrogenase from crown gall tumor tissue, a tool in studies of plant cell transformation

Arlette Goldmann, Thérése Moureaux, Pierre Rouzé

Journal:

Year:

1981

Language:

english

File:

PDF, 420 KB

english, 1981

27

Identification by mutational analysis of four critical residues in the molybdenum cofactor domain of eukaryotic nitrate reductase

Christian Meyer, Martine Gonneau, Michel Caboche, Pierre Rouzé

Journal:

Year:

1995

Language:

english

File:

PDF, 674 KB

english, 1995

28

Sequence analysis of a 24-kb contiguous genomic region at the Arabidopsis thaliana PFL locus on chromosome 1

Nancy Terryn, Pia Neyt, Rebecca De Clercq, Annick De Keyser, Hilde Van Den Daele, Wilson Ardiles, Patrice Déhais, Pierre Rouzé, Jan Gielen, Raimundo Villarroel, Marc Van Montagu

Journal:

Year:

1997

Language:

english

File:

PDF, 714 KB

english, 1997

29

Plant genomics

Nancy Terryn, Pierre Rouzé, Marc Van Montagu

Journal:

Year:

1999

Language:

english

File:

PDF, 56 KB

english, 1999

30

Sequence analysis of a 40-kb Arabidopsis thaliana genomic region located at the top of chromosome 1

Nancy Terryn, Jan Gielen, Annick De Keyser, Hilde Van Den Daele, Wilson Ardiles, Pia Neyt, Rebecca De Clercq, Jeroen Coppieters, Patrice Déhais, Raimundo Villarroel, Pierre Rouzé, Marc Van Montagu

Journal:

Year:

1998

Language:

english

File:

PDF, 81 KB

english, 1998

31

The sense of naturally transcribed antisense RNAs in plants

Nancy Terryn, Pierre Rouzé

Journal:

Trends in Plant Science

Year:

2000

Language:

english

File:

PDF, 249 KB

english, 2000

32

The genome of Tetranychus urticae reveals herbivorous pest adaptations

Grbić, Miodrag, Van Leeuwen, Thomas, Clark, Richard M., Rombauts, Stephane, Rouzé, Pierre, Grbić, Vojislava, Osborne, Edward J., Dermauw, Wannes, Thi Ngoc, Phuong Cao, Ortego, Félix, Hernández-Crespo,

Journal:

Year:

2011

Language:

english

File:

PDF, 852 KB

english, 2011

33

Heat sensitivity of porcine IgG

Jean-Jacques Metzger, Christiane Bourdieu, Pierre Rouze, Monique Houdayer

Journal:

Journal of Immunological Methods

Year:

1975

Language:

english

File:

PDF, 382 KB

english, 1975

34

Characterization of seven monoclonal antibodies directed against Nicotiana plumbaginifolia ribulose 1,5-biphosphate carboxylase/oxygenase

Christian Meyer, Jeanne Grosclaude, Pierre Rouzé

Journal:

Year:

1991

Language:

english

File:

PDF, 921 KB

english, 1991

35

PPMdb: a plant plasma membrane database

Ilhem Sahnoun, Patrice Déhais, Marc Van Montagu, Michel Rossignol, Pierre Rouzé

Journal:

Journal of Biotechnology

Year:

2000

Language:

english

File:

PDF, 1.24 MB

english, 2000

36

Gene prediction and gene classes in Arabidopsis thaliana

Catherine Mathé, Patrice Déhais, Nathalie Pavy, Stephane Rombauts, Marc Van Montagu, Pierre Rouzé

Journal:

Journal of Biotechnology

Year:

2000

Language:

english

File:

PDF, 187 KB

english, 2000

37

Open access to sequence: Browsing thePichia pastorisgenome

Diethard Mattanovich, Nico Callewaert, Pierre Rouzé, Yao-Cheng Lin, Alexandra Graf, Andreas Redl, Petra Tiels, Brigitte Gasser, Kristof De Schutter

Journal:

Microbial Cell Factories

Year:

2009

Language:

english

File:

PDF, 603 KB

english, 2009

38

A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes

Thijs, Gert, Marchal, Kathleen, Lescot, Magali, Rombauts, Stephane, De Moor, Bart, Rouzé, Pierre, Moreau, Yves

Journal:

Journal of Computational Biology

Year:

2002

Language:

english

File:

PDF, 498 KB

english, 2002

39

Bromphenol blue: nitrate reductase activity in Nicotiana plumbaginifolia: an immunochemical and genetic approach

Meyer, Christian, Cherel, Isabelle, Moureaux, Thérèse, Hoarau, Jackson, Gabard, Jérôme, Rouze, Pierre

Journal:

Year:

1987

Language:

english

File:

PDF, 832 KB

english, 1987

40

Immunological comparative studies of octopine dehydrogenase and other “pyruvate reductases” from different species

Fort, Laurence, Dando, Paul R., Rouzé, Pierre, Monneuse, Marie-Odile, Olomucki, Anna

Journal:

Comparative Biochemistry and Physiology Part B: Comparative Biochemistry

Year:

1982

Language:

english

File:

PDF, 1.14 MB

english, 1982

41

Cloning and analysis of the tomato nitrate reductase-encoding gene: protein domain structure and amino acid homologies in higher plants

Daniel-Vedele, Françoise, Dorbe, Marie-France, Caboche, Michel, Rouzé, Pierre

Journal:

Year:

1989

Language:

english

File:

PDF, 974 KB

english, 1989

42

The Small RNA World of Plants

Eric Bonnet, Yves Van de Peer and Pierre Rouzé

Journal:

New Phytologist

Year:

2006

Language:

english

File:

PDF, 3.72 MB

english, 2006

43

ORCAE: online resource for community annotation of eukaryotes

Sterck, Lieven, Billiau, Kenny, Abeel, Thomas, Rouzé, Pierre, Van de Peer, Yves

Journal:

Year:

2012

Language:

english

File:

PDF, 139 KB

english, 2012

44

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne

Ruttink, Tom, Sterck, Lieven, Rohde, Antje, Bendixen, Christian, Rouzé, Pierre, Asp, Torben, Van de Peer, Yves, Roldan-Ruiz, Isabel

Journal:

Plant Biotechnology Journal

Year:

2013

Language:

english

File:

PDF, 581 KB

english, 2013

45

[ACM Press the fifth annual international conference - Montreal, Quebec, Canada (2001.04.22-2001.04.25)] Proceedings of the fifth annual international conference on Computational biology - RECOMB '01 - A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes

Thijs, Gert, Marchal, Kathleen, Lescot, Magali, Rombauts, Stephane, De Moor, Bart, Rouzé, Pierre, Moreau, Yves

Year:

2001

File:

PDF, 198 KB

2001

46

Prediction of Long-Term Survival After Liver Transplantation for Familial Transthyretin Amyloidosis

Algalarrondo, Vincent, Antonini, Teresa, Théaudin, Marie, Ducot, Béatrice, Lozeron, Pierre, Chemla, Denis, Benmalek, Anouar, Lacroix, Catherine, Azoulay, Daniel, Castaing, Denis, Cauquil, Cécile, Rouz

Journal:

Journal of the American College of Cardiology

Year:

2015

Language:

english

File:

PDF, 211 KB

english, 2015

47

The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

Olsen, Jeanine L., Rouzé, Pierre, Verhelst, Bram, Lin, Yao-Cheng, Bayer, Till, Collen, Jonas, Dattolo, Emanuela, De Paoli, Emanuele, Dittami, Simon, Maumus, Florian, Michel, Gurvan, Kersting, Anna, La

Journal:

Year:

2016

Language:

english

File:

PDF, 14.43 MB

english, 2016

48

Computational Approaches to Identify Promoters and cis-Regulatory Elements in Plant Genomes

Stephane Rombauts, Kobe Florquin, Magali Lescot, Kathleen Marchal, Pierre Rouzé and Yves Van de Peer

Journal:

PLANT PHYSIOLOGY

Year:

2003

Language:

english

File:

PDF, 2.78 MB

english, 2003

49

Genome-Wide Analysis of Core Cell Cycle Genes in Arabidopsis

Klaas Vandepoele, Jeroen Raes, Lieven De Veylder, Pierre Rouzé, Stephane Rombauts and Dirk Inzé

Journal:

Year:

2002

Language:

english

File:

PDF, 2.18 MB

english, 2002

50

Complex Evolutionary Dynamics of Massively Expanded Chemosensory Receptor Families in an Extreme Generalist Chelicerate Herbivore

Ngoc, Phuong Cao Thi, Greenhalgh, Robert, Dermauw, Wannes, Rombauts, Stephane, Bajda, Sabina, Zhurov, Vladimir, Grbić, Miodrag, Van de Peer, Yves, Van Leeuwen, Thomas, Rouzé, Pierre, Clark, Richard M.

Journal:

Genome Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 1.46 MB

english, 2016